Insertion junction: CLIP2.063176_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063176
Chromosome:chromosome 4
Location:3925951
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g230928 TRL13 (1 of 1) K10758 - thiol oxidase (QSOX); Thioredoxin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCCCAAACTAAACCAAACCAAGCCAAGGGGAAGGGAGAGGGGCCTG
Internal bar code:GCTAGGTGAGGAGGGTAGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:248
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCAGCAGCCGTAGACACC
Suggested primer 2:CCTGCGCCATTGTAACATCG