Insertion junction: CLIP2.063181_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063181
Chromosome:chromosome 16
Location:515375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692751 PDI3 Protein disulfide isomerase 3; (1 of 1) K13984 - thioredoxin domain-containing protein 5 (TXNDC5, ERP46) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGGGCGGGCTGGAGGGGCTGCCACGCGCGTGCAACACCTGCACCCTC
Internal bar code:ACTTGAACCACTTACCCAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1716
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACTCCAGAGACGCCTG
Suggested primer 2:GACGAGTCAGCACAAGGTCA