Insertion junction: CLIP2.063182_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063182
Chromosome:chromosome 2
Location:1565867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084750 (1 of 1) PTHR24012:SF497 - TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGTGGAGCAGGATTGGCACGTGTCTGTGTGTGGAATTGGTTGCGTG
Internal bar code:TCGTTATTTCAAGGCGTGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2488
LEAP-Seq percent confirming:67.5676
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGTCAGCGTTGTCTGAT
Suggested primer 2:CGGGGTTGTTACATCTGCCT