Insertion junction: CLIP2.063184_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063184
Chromosome:chromosome 14
Location:2792483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g626550 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGGGCAGGAGTGCGCGGCTGGTCGAACGCCTGAGTTACTGTACTGA
Internal bar code:GGTTTGGTAAACGTCGGGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2299
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTACGGTATGGTCAGGCT
Suggested primer 2:ATTACGCTGAGAGCCGTAGC