Insertion junction: CLIP2.063190_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063190
Chromosome:chromosome 3
Location:7898162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202550 ELG11 Exostosin-like glycosyltransferase 11; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGGCAATTACTAGAACTGCATTCAAAAACAATTGATTGGCTCAATGC
Internal bar code:TGAGAGGCGTTGGTTAGGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3470
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACGACAAACACGACAC
Suggested primer 2:ATCGTCGTCATCAGCATCCC