Insertion junction: CLIP2.063204_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063204
Chromosome:chromosome 10
Location:58833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g417850 (1 of 1) IPR003613//IPR011047 - U box domain // Quinonprotein alcohol dehydrogenase-like superfamily 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATAGTCTTCAGCGGCCAGGTTCGCGCTCCTCGCCGCGTTGTGATCGCC
Internal bar code:TTCAGGGTGGTCTTGGTCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGTCGGTATTGTTGCT
Suggested primer 2:CAGATGCTGCTGTTGATGCC