Insertion junction: CLIP2.063211_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063211
Chromosome:chromosome 4
Location:2394149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221301 CYCD5 D-type cyclin; (1 of 10) PTHR10177 - CYCLINE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCCTAGAGCTAGCTTGCCTTGATTGCGCGCCTGCGCTGCCCGGTGT
Internal bar code:TTGTCCATTAGTAAAGGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTAGAGTAGGAAGGCG
Suggested primer 2:TGCCAACCATGATGCCTGAT