Insertion junction: CLIP2.063215_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063215
Chromosome:chromosome 11
Location:3067585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g474850 PUS17 (1 of 2) 5.4.99.29 - 23S rRNA pseudouridine(746) synthase / 23S RNA Psi(746) synthase; RNA pseudouridine synthase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGAATGAAAATCGCAAAACCATGTCATGCATGAATTGGACCGCGAGTT
Internal bar code:TGATCCGATCAGTAGTGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4190
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTATAGCGCCCCGAACC
Suggested primer 2:GGCGCTATACGTGGCTGTAT