Insertion junction: CLIP2.063217_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063217
Chromosome:chromosome 1
Location:337093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGAAGAACGGATCCCAGCATAGCGTACAGCCGATTGGTCCCTGTCG
Internal bar code:AAGTTCGGTGAAGGTAGTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:801
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACTTCTCCGAACTGTGA
Suggested primer 2:CCCGTGGACTGTTCGTAACA