Insertion junction: CLIP2.063217_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063217
Chromosome:chromosome 1
Location:337116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACATGCCGGCCAGCCATGCCGCATGGTGCGCACGCAGGTCTCGCCTT
Internal bar code:AAGTTCGGTGAAGGTAGTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1589
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTGGACTGTTCGTAACA
Suggested primer 2:GCCACTTCTCCGAACTGTGA