Insertion junction: CLIP2.063224_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063224
Chromosome:chromosome 10
Location:3874527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446250 (1 of 1) K13339 - peroxin-6 (PEX6, PXAAA1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCATAGACTACAGCAACGGCCCTGTTCAGGCTGGCCCGTTTGTACCC
Internal bar code:CAATGTGTGGAACCCGACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2563
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATACTACCCAAGCACCC
Suggested primer 2:CACGGCAGCTTTCCATATGC