Insertion junction: CLIP2.063234_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063234
Chromosome:chromosome 3
Location:3494631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167250 (1 of 1) PF05673 - Protein of unknown function (DUF815) (DUF815) 3'UTR
Cre03.g167300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTACAAGTAGCACCAGGAGCACAAGATACTTACTTGTATCAGACAGC
Internal bar code:TGGGTCATCCTGGGCAGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTCACCACCAAGGACC
Suggested primer 2:GTGGCGGATACTGTCGAGAG