Insertion junction: CLIP2.063239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063239
Chromosome:chromosome 12
Location:5528066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530450 (1 of 4) IPR001841//IPR018957 - Zinc finger, RING-type // Zinc finger, C3HC4 RING-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGCTTACTGACAAGCCCACCACTGCAGCACCCTCCCACGGCAGTGCT
Internal bar code:GTCAATTACCCTTGATTAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3443
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGTTGGACCAGGAGCAG
Suggested primer 2:CGGACCTGCTTTTTGTTGGG