Insertion junction: CLIP2.063239_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063239
Chromosome:chromosome 12
Location:5530311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530450 (1 of 4) IPR001841//IPR018957 - Zinc finger, RING-type // Zinc finger, C3HC4 RING-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAACAGGAATACATGCAATCAACTTACGATGCTACGAAACAACAGCT
Internal bar code:TACAATAAGTTTGATAATTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACCTGCTTTTTGTTGGG
Suggested primer 2:CTGAGTTGGACCAGGAGCAG