Insertion junction: CLIP2.063241_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063241
Chromosome:chromosome 6
Location:4682823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278700 Conserved Ankyrin-Repeat Protein; (1 of 1) PTHR24193:SF69 - IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574 HOMOLOG-RELATED 3'UTR
Cre06.g278750 UCP1 (1 of 1) PTHR24089//PTHR24089:SF200 - FAMILY NOT NAMED // MITOCHONDRIAL UNCOUPLING PROTEIN 1; mitochondrial uncoupling protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACATGGTGGGTGCTGTGAACTGTAATCCATACTTGAAGTTTCTGCAA
Internal bar code:ATTGTAGTAGCTCTGTCACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2937
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTACAGTGCAACGTGAGG
Suggested primer 2:GTGCAAAAGGGCAGTTCCTG