Insertion junction: CLIP2.063244_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063244
Chromosome:chromosome 3
Location:899187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146567 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGCCACTGGCCTTGCACACACTCCAACTGGCCCACCACTCCACAACC
Internal bar code:GTAGTATTCTAGGGGGATGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3152
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTGCTCAGTTTGGTGG
Suggested primer 2:TCTCAATTGCAGCGGGTCTT