Insertion junction: CLIP2.063249_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063249
Chromosome:chromosome 2
Location:5315954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATGTGCCTGCTTGCTGTTGCTGCGGATGATTAGTCATGGCGGCCAAC
Internal bar code:TCGTATAGTCTGGGGCGACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3446
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGAACGTCACAAGAGGA
Suggested primer 2:TGCTCGTTGTTACCACAGCT