Insertion junction: CLIP2.063251_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063251
Chromosome:chromosome 17
Location:2451638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715100 (1 of 1) PF15249 - Conserved region of unknown function on GLTSCR protein (GLTSCR1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCCAATGGGGAAATCCCAGGCTGGCAGATGGGCGGCCGTATCCATTG
Internal bar code:ATTATGATCCACTTTGAAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2055
LEAP-Seq percent confirming:74.5455
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CGATATGCACTGGCGTTTGG
Suggested primer 2:GAGCCCGTGACACCTTGTAA