Insertion junction: CLIP2.063253_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063253
Chromosome:chromosome 1
Location:1788664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009950 NEP1 NEP1-like protein; (1 of 1) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGTACAGGCAGGTAATTATCCGCTTCGGGCCCCATGTGTACTGAGG
Internal bar code:GACATCGCTCAGTATATGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4624
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCTGACGCTGTGACTTC
Suggested primer 2:AGAATAACGCCGCTCGAGAG