Insertion junction: CLIP2.063253_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063253
Chromosome:chromosome 3
Location:8615517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGTGCATGGCCTGCCGGCTTGGTAGACGCAACGAAACCTACTTGTGC
Internal bar code:AAGGGTGAATAAGACGTCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3459
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTTTCACTGACGAGGGT
Suggested primer 2:CGCGGCCATAAGAAACTTCG