Insertion junction: CLIP2.063258_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063258
Chromosome:chromosome 12
Location:4549882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521350 SLY1 (1 of 1) PTHR11679:SF2 - SEC1 FAMILY DOMAIN-CONTAINING PROTEIN 1; SM/Sec1-family protein, SLY1 homolog 5'UTR
Cre12.g521400 (1 of 1) 6.3.5.11 - Cobyrinate a,c-diamide synthase (glutamine-hydrolyzing) / Cobyrinic acid a,c-diamide synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCAAAAGCCTTCAATGAGCGAATAGGAAATGCCGCGAGCGCTGTTTA
Internal bar code:TAGGTGGCGTCCCTGTTAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACGGGTCCGAATTCACA
Suggested primer 2:ACCTCTCCACCTGATACCCC