Insertion junction: CLIP2.063260_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063260
Chromosome:chromosome 16
Location:5276889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684000 (1 of 1) PTHR23153//PTHR23153:SF36 - UBX-RELATED // SUBFAMILY NOT NAMED 3'UTR
Cre16.g684022 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTAGACACGTCCAACAACGACTTGAACTTGTTCAAGGTTGAAGGGTA
Internal bar code:TAATAAGAACCTCAGCTCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2305
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCCGCTCAGCTGATACC
Suggested primer 2:AGCTAGTGTGGGAGGAGGAG