Insertion junction: CLIP2.063260_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063260
Chromosome:chromosome 16
Location:5276890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684000 (1 of 1) PTHR23153//PTHR23153:SF36 - UBX-RELATED // SUBFAMILY NOT NAMED 3'UTR
Cre16.g684022 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACACCTCCGAAGTGAGGGGAGCGTTCGCTGCCAGCGAGAAGCCTATC
Internal bar code:TAATAAGAACCTCAGCTCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTAGTGTGGGAGGAGGAG
Suggested primer 2:GATCCCGCTCAGCTGATACC