Insertion junction: CLIP2.063264_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063264
Chromosome:chromosome 9
Location:3280373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395102 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTAGCTCTCCACGTACCCTGCACACCTAGCTTGTGTCCGTGCTAGGC
Internal bar code:ATGGGTAGCTGACATATAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2159
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGACTGGCATCCGTAGA
Suggested primer 2:TGCCTGGTCACTGGAATGAC