Insertion junction: CLIP2.063268_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063268
Chromosome:chromosome 10
Location:465394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420900 HEL44 (1 of 1) K13181 - ATP-dependent RNA helicase DDX27 [EC:3.6.4.13] (DDX27, DRS1); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGTGCAGCTCACCCCGGTCCCCGTAGCCTCCTTAAGCCTCTCAAAA
Internal bar code:AATGAAGGACCGGCGTCGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2028
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCTTACAAGTCCCGGC
Suggested primer 2:AACGTAGGAATGCCCGTTGT