Insertion junction: CLIP2.063271_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063271
Chromosome:chromosome 7
Location:2885639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332450 (1 of 1) PTHR31528//PTHR31528:SF1 - FAMILY NOT NAMED // PYRIMIDINE PRECURSOR BIOSYNTHESIS ENZYME THI11-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCATTGTCCTTGCAGCTTCCTTGCATGCCACGACCAGTTGCACAACT
Internal bar code:TTGCCCCGAGAGAACTGACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCATGCCTCCTTCTCGTC
Suggested primer 2:CGAAGCGCTGAATGTGATGG