Insertion junction: CLIP2.063272_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063272
Chromosome:chromosome 13
Location:871556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567450 HON1 Histone H1; (1 of 3) K11275 - histone H1/5 (H1_5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCGCCGCGGGCCCAGCATACCTAGTGTCCCGCGGCGTACCGAAGCAG
Internal bar code:ACGAGGCAGTTTTCTGTGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2487
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATAGCGGGCAGAGGAG
Suggested primer 2:TCGCTGGCCATCAAGACTTT