Insertion junction: CLIP2.063292_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063292
Chromosome:chromosome 16
Location:3713741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680944 (1 of 1) K14539 - large subunit GTPase 1 (LSG1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGGCACAATAGCTATTTTTCAGATAATAACTTCTATCTGTGCAGCC
Internal bar code:AACACCTAGACATCGCCAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:912
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGTGTGCTTGAAGTTGG
Suggested primer 2:CTCGATAGTGCCGCTGGATT