Insertion junction: CLIP2.063295_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063295
Chromosome:chromosome 13
Location:2136028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577500 VTI1 (1 of 1) K08493 - vesicle transport through interaction with t-SNAREs 1 (VTI1); Endosomal Qb-SNARE, Vti1-family (Qb.III.b) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAACATACTAAAGCCCCGCTCGACTTCCTGCAGCTTTTGACATTTAAC
Internal bar code:TTGGACGATCCATTCGGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATGCTGGCACCTTCCAC
Suggested primer 2:TGAGTAGTGGTCATGCAGCG