Insertion junction: CLIP2.063295_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063295
Chromosome:chromosome 13
Location:2136031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577500 VTI1 (1 of 1) K08493 - vesicle transport through interaction with t-SNAREs 1 (VTI1); Endosomal Qb-SNARE, Vti1-family (Qb.III.b) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCACACGTTGACCAAGAGCAGTGAATTCACAAATGCCACGTTTGCGTA
Internal bar code:TTGGACGATCCATTCGGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTAGTGGTCATGCAGCG
Suggested primer 2:AGTATGCTGGCACCTTCCAC