Insertion junction: CLIP2.063298_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063298
Chromosome:chromosome 11
Location:372434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467580 FAP370 Flagellar Associated Protein 370 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGGGGTGGAGTAAGGAGGACAGGGTAGCGAGGACTGTGCCTCTTGC
Internal bar code:GCTGGGACAAAGGAAGGCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1304
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGAGTTGCATTCGAGCG
Suggested primer 2:TGTTGGACTGGTGCTGGATC