Insertion junction: CLIP2.063306_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063306
Chromosome:chromosome 3
Location:6679125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195410 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAATGCCCACTCATAGCGGCGTCTGCAAGCGCAGGGTTATGCTTAAGT
Internal bar code:GAGGATAAATAGCATATGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5716
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTGTTGATGTTGGGTTT
Suggested primer 2:GAAGCTCATGCGGCAAGATG