Insertion junction: CLIP2.063310_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063310
Chromosome:chromosome 12
Location:2760450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504200 RPS23 (1 of 1) K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23); Cytosolic 80S ribosomal protein S23 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCGCGGACTTGGGGCGGGCCGTCCCCACCAGTCTCCCTCTTTCTTT
Internal bar code:GGAGCGCTCAAAACAGCTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:798
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGCGGCAATCTTCTTG
Suggested primer 2:CACACATTCTGGTCGTCCCA