Insertion junction: CLIP2.063311_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063311
Chromosome:chromosome 6
Location:6460590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293850 CAG2 Gamma carbonic anhydrase 2; (1 of 1) PTHR13061//PTHR13061:SF0 - DYNACTIN SUBUNIT P25 // GAMMA CARBONIC ANHYDRASE-LIKE 1, MITOCHONDRIAL-RELATED 3'UTR
Cre06.g293900 (1 of 1) PTHR23333:SF4 - UBX DOMAIN-CONTAINING PROTEIN 11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTACGTCTACCAGGCACGAAACAGCCATCCAGCCCGCTCACACCGGA
Internal bar code:AACGAGGGGTAAGGGAGTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2611
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTACCGTACCCCCAACA
Suggested primer 2:GGGTGATACTAGGGCGTTCG