Insertion junction: CLIP2.063318_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063318
Chromosome:chromosome 13
Location:3900692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589800 (1 of 4) PTHR10110//PTHR10110:SF119 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 5-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAGCTTTCTCAGGCCTCTGTGTACCTACCTGTTGAGCCTCCCAGGCA
Internal bar code:CGTTTCAGGGCGCTAGGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1102
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGTTGAAGTTTCCTGTG
Suggested primer 2:GAGATGGGCGATCGATGTGT