Insertion junction: CLIP2.063324_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063324
Chromosome:chromosome 6
Location:3917299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278192 (1 of 1) PTHR15627:SF8 - DTW DOMAIN-CONTAINING PROTEIN 1 3'UTR
Cre06.g278193 gene_edge/outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACATTTTGTTACAACTTGCAGGCTAACAGGCTTACACTCGGGTGCCG
Internal bar code:AAGCGAGGAGGGAGTGAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:6349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTATTGCGCTGTGAATG
Suggested primer 2:GGACGAGATTGCATTGCGAC