Insertion junction: CLIP2.063328_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063328
Chromosome:chromosome 2
Location:6684725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387171 RHM1,DIV109,EZY22 nucleotide-rhamnose synthase/epimerase-reductase, dTDP-4-dehydrorhamnose reductase / dTDP-6-deoxy-L-mannose dehydrogenase; (1 of 1) 1.1.1.133 - dTDP-4-dehydrorhamnose reductase / dTDP-6-deoxy-L-mannose dehydrogenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGTGAAATGCAGCCTGGCCGGGCGGGTGGGCTGTATACTCGAAGCAC
Internal bar code:TTTCTAGTCCATCAGCAGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:101
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCTCCCTGCTTCTTCAG
Suggested primer 2:ACAGCTTGTGTCCGTACAGG