Insertion junction: CLIP2.063333_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063333
Chromosome:chromosome 3
Location:4344826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174600 (1 of 3) PF13771 - PHD-like zinc-binding domain (zf-HC5HC2H) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATGTAGGCGTTACCCCCAGCATGGTAAGTCCTGGCAGGGGAAACCCT
Internal bar code:CCATAGCCTTCTGAGAAGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1044
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAACGTACAGTGCTGT
Suggested primer 2:AGAGGCAGCTGATGGAAACC