Insertion junction: CLIP2.063336_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063336
Chromosome:chromosome 6
Location:4885149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280500 PPP23 (1 of 1) PTHR23081//PTHR23081:SF1 - RNA POLYMERASE II CTD PHOSPHATASE // RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 2; Phosphoprotein phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAGGGTTCGCGGAGGCGGGCCTCCTGTGGCGGGGCTTCACAGTTACG
Internal bar code:TGTTTTGCCACGGGTCCATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCTACGTGTCCCCTGAG
Suggested primer 2:CGGTGATGGTGTGGAAGAGT