Insertion junction: CLIP2.063338_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063338
Chromosome:chromosome 4
Location:779346
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g800447 (1 of 1) PTHR32166:SF33 - HAT FAMILY DIMERIZATION DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCAGACGGCGCCTCGAACGGGGACTGCCACCTGGCAACCCCGGCGAA
Internal bar code:TATTGTCGGCGATGCGCACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:79
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCCAACCATTGCTTCA
Suggested primer 2:GCAGCCCTAAACCCAGACTT