Insertion junction: CLIP2.063339_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063339
Chromosome:chromosome 12
Location:3024015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCTGCCTCTGGGCGCACACGGGTTCGCAGGGGGGGCGGCTGGCTGG
Internal bar code:CACTACAGAACGGTTTGGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1246
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCGCGATGTCACAGCAG
Suggested primer 2:CGTATTGCGTGAATGGCCTG