Insertion junction: CLIP2.063340_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063340
Chromosome:chromosome 10
Location:2123144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433200 UAPA4,UAPA3,XUV3 Xanthine/uracil/vitamin C permease-like; (1 of 4) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGCTCCTATGCATTGCTGTGCTGCCGTGCCGTTACTGCCAACACACC
Internal bar code:TATGCGCGTCCGCCAGCGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3252
LEAP-Seq percent confirming:70.9677
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCGCTCTCCTCTCTTGCT
Suggested primer 2:CCGCGTCATTCCGTTCATTC