Insertion junction: CLIP2.063342_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063342
Chromosome:chromosome 9
Location:6764210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417250 ELG27 Exostosin-like glycosyltransferase 27; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGTGCCGCGACCGCGCGAATTCCCTACATCCCGAGATTCCCGACTCA
Internal bar code:TCTGTATGCATCGATAAATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3333
LEAP-Seq percent confirming:99.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGCATTGTTCTAGGGCC
Suggested primer 2:AGTTGTGCCAGTGTTTCCCA