Insertion junction: CLIP2.063348_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063348
Chromosome:chromosome 14
Location:1420311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617100 SRS9,SRS12 Serine/arginine-rich pre-mRNA splicing factor; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGAGTCGGAGGAGTGAAGTACTGAGCCAACTCCAATGAAGTTCTGCA
Internal bar code:CAATATTCTTGTAGCGGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1806
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTATTCCCTCGACCTCAGCG
Suggested primer 2:CTATCGCGCACAACCCATTG