Insertion junction: CLIP2.063356_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063356
Chromosome:chromosome 9
Location:6019568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCTAGCCGTCATGCAACTTAAGACGTGTTCTTCTTGAGTTCCGGTTC
Internal bar code:CCGATATTGGCAACTATAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2696
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGTTGCTTTGCTTGGCG
Suggested primer 2:CCCTGTGCGAACAAAATGCA