Insertion junction: CLIP2.063358_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063358
Chromosome:chromosome 15
Location:1258052
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g801725 NCL64 Nuclear Control of chloroplast-Like 64; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCGTACAGCAGGTTGGCCCAATCCTGCGGCTTGGCGCCGGCCATGA
Internal bar code:CTTTTGTCGCTACACGGTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4535
LEAP-Seq percent confirming:2.5641
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:76
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGGCTCTAGAGGTCCT
Suggested primer 2:AAGCGCCTGATAGCAGATCC