Insertion junction: CLIP2.063359_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063359
Chromosome:chromosome 6
Location:3971321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278204 (1 of 4) PTHR10334//PTHR10334:SF224 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAAGCACCAACGCGCCACAACTCAGCGCAAACTTGTGTCTGCGTTAG
Internal bar code:TAATAGTCCAAATTATTTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3559
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAACACTAGCCAGGAA
Suggested primer 2:CATGAATCTGTGCGAGCTGC