Insertion junction: CLIP2.063388_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063388
Chromosome:chromosome 9
Location:5126571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406416 (1 of 1) PTHR23322:SF3 - PROTEIN SAY1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTCGGAGTGAGATTATTGATGATGCACGCAGTCCGTTGCTGTGTAT
Internal bar code:TCATGACTGCCAATCACTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCTTGAGAGCCTTTCCC
Suggested primer 2:CTTTCATTCCCTTCCCGCCT