Insertion junction: CLIP2.063390_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063390
Chromosome:chromosome 1
Location:520701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003150 protein of unknown function 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATTGGGAAGGGCAAAAGCCCCGCAAAAACAACGGTAAGCGGCTTGTT
Internal bar code:ATGATCCAAGTTCTCTACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACAAATGCACACACAGT
Suggested primer 2:CAAACATGAGGCGGCGTATG