Insertion junction: CLIP2.063398_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063398
Chromosome:chromosome 1
Location:2486971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800045 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTAAACCCAAATCGTAGAAGGGAGTTTGCACAATCAAAATGTAGAGCA
Internal bar code:TGAGTATCGCAAGTCCCGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4193
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:143
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:143

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACAGTGAGCACGTGTG
Suggested primer 2:CAATGCAGTTGGTGTGGGTG